Cluster: Rep_3477_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3477
- CGC Family ID: CGCFAM_00766
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3477_c_0 | Rep_3477_c_0_1148 | 1232192 | 1234432 | + | GT51 |
| pfam | Rep_3477_c_0 | Rep_3477_c_0_1149 | 1234445 | 1235563 | + | UPF0020 | THUMP | RlmL_1st |
| TC | Rep_3477_c_0 | Rep_3477_c_0_1150 | 1235861 | 1236421 | + | 2.A.107.1.2 |
Gene ID: Rep_3477_c_0_1148
Type: CAZyme
Location: 1232192 - 1234432 (+)
Type: CAZyme
Location: 1232192 - 1234432 (+)
Gene ID: Rep_3477_c_0_1149
Type: pfam
Location: 1234445 - 1235563 (+)
Type: pfam
Location: 1234445 - 1235563 (+)
Gene ID: Rep_3477_c_0_1150
Type: TC
Location: 1235861 - 1236421 (+)
Type: TC
Location: 1235861 - 1236421 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola butyrica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.