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Cluster: Rep_3477_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3477_c_0 Rep_3477_c_0_652 717243 719747 + 3.A.3.5.15
STP Rep_3477_c_0 Rep_3477_c_0_653 720084 720608 - Pribosyltran
TC Rep_3477_c_0 Rep_3477_c_0_654 720648 722006 - 2.A.40.7.6
pfam Rep_3477_c_0 Rep_3477_c_0_655 722172 724550 - UvrD-helicase | UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2 | PcrA_UvrD_tudor
TC Rep_3477_c_0 Rep_3477_c_0_656 724783 726132 + 2.A.22.5.3
CAZyme Rep_3477_c_0 Rep_3477_c_0_657 726239 728053 + GH146
Gene ID: Rep_3477_c_0_652
Type: TC
Location: 717243 - 719747 (+)
Gene ID: Rep_3477_c_0_653
Type: STP
Location: 720084 - 720608 (-)
Gene ID: Rep_3477_c_0_654
Type: TC
Location: 720648 - 722006 (-)
Gene ID: Rep_3477_c_0_655
Type: pfam
Location: 722172 - 724550 (-)
Gene ID: Rep_3477_c_0_656
Type: TC
Location: 724783 - 726132 (+)
Gene ID: Rep_3477_c_0_657
Type: CAZyme
Location: 726239 - 728053 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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