Cluster: Rep_3477_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3477
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3477_c_0 | Rep_3477_c_0_424 | 461519 | 463186 | + | 4.C.1.1.6 |
| pfam | Rep_3477_c_0 | Rep_3477_c_0_425 | 463615 | 464103 | + | tRNA_edit |
| CAZyme | Rep_3477_c_0 | Rep_3477_c_0_426 | 464212 | 465195 | + | GH113 |
| TF | Rep_3477_c_0 | Rep_3477_c_0_427 | 465341 | 465718 | + | GntR |
| TC | Rep_3477_c_0 | Rep_3477_c_0_428 | 465724 | 466587 | + | 3.A.1.149.1 |
Gene ID: Rep_3477_c_0_424
Type: TC
Location: 461519 - 463186 (+)
Type: TC
Location: 461519 - 463186 (+)
Gene ID: Rep_3477_c_0_425
Type: pfam
Location: 463615 - 464103 (+)
Type: pfam
Location: 463615 - 464103 (+)
Gene ID: Rep_3477_c_0_426
Type: CAZyme
Location: 464212 - 465195 (+)
Type: CAZyme
Location: 464212 - 465195 (+)
Gene ID: Rep_3477_c_0_427
Type: TF
Location: 465341 - 465718 (+)
Type: TF
Location: 465341 - 465718 (+)
Gene ID: Rep_3477_c_0_428
Type: TC
Location: 465724 - 466587 (+)
Type: TC
Location: 465724 - 466587 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola butyrica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.