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Cluster: Rep_3477_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3477_c_0 Rep_3477_c_0_2716 2777346 2778119 - GT2
TF Rep_3477_c_0 Rep_3477_c_0_2717 2778136 2778945 - HTH_AraC
TC Rep_3477_c_0 Rep_3477_c_0_2718 2779529 2781340 + 1.A.34.1.1
NULL(UNKNOWN) Rep_3477_c_0 Rep_3477_c_0_2719 2781441 2782109 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3477_c_0 Rep_3477_c_0_2720 2782337 2783719 + 2.A.38.4.3
peptidase Rep_3477_c_0 Rep_3477_c_0_2721 2783730 2784473 + S33.UNW
TC Rep_3477_c_0 Rep_3477_c_0_2722 2784496 2785149 + 2.A.38.4.6
Gene ID: Rep_3477_c_0_2716
Type: CAZyme
Location: 2777346 - 2778119 (-)
Gene ID: Rep_3477_c_0_2717
Type: TF
Location: 2778136 - 2778945 (-)
Gene ID: Rep_3477_c_0_2718
Type: TC
Location: 2779529 - 2781340 (+)
Gene ID: Rep_3477_c_0_2719
Type:
Location: 2781441 - 2782109 (-)
Gene ID: Rep_3477_c_0_2720
Type: TC
Location: 2782337 - 2783719 (+)
Gene ID: Rep_3477_c_0_2721
Type: peptidase
Location: 2783730 - 2784473 (+)
Gene ID: Rep_3477_c_0_2722
Type: TC
Location: 2784496 - 2785149 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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