dbCAN HGM

Cluster: Rep_3477_CGC24

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_3477_c_0	Rep_3477_c_0_2143	2235741	2237174	-	2.A.38.1.1
TC	Rep_3477_c_0	Rep_3477_c_0_2144	2237217	2238572	-	2.A.38.1.1
pfam	Rep_3477_c_0	Rep_3477_c_0_2145	2238596	2239423	-	Acetyltransf_1 \| Acetyltransf_1 \| Acetyltransf_7 \| Acetyltransf_10
CAZyme	Rep_3477_c_0	Rep_3477_c_0_2146	2239434	2240228	-	GT8
TC	Rep_3477_c_0	Rep_3477_c_0_2147	2240225	2241589	-	2.A.66.1.32
TC	Rep_3477_c_0	Rep_3477_c_0_2148	2241842	2242564	+	2.A.78.1.1
TC	Rep_3477_c_0	Rep_3477_c_0_2149	2242580	2242909	+	2.A.78.1.1
TC	Rep_3477_c_0	Rep_3477_c_0_2150	2243262	2244488	+	3.A.1.4.10
TC	Rep_3477_c_0	Rep_3477_c_0_2151	2244710	2245594	+	3.A.1.4.10
TC	Rep_3477_c_0	Rep_3477_c_0_2152	2245607	2246704	+	3.A.1.4.8
TC	Rep_3477_c_0	Rep_3477_c_0_2153	2246701	2247459	+	3.A.1.4.10
TC	Rep_3477_c_0	Rep_3477_c_0_2154	2247476	2248186	+	3.A.1.4.10
TC	Rep_3477_c_0	Rep_3477_c_0_2155	2248221	2248838	+	2.A.115.2.14

Gene ID: Rep_3477_c_0_2143
Type: TC
Location: 2235741 - 2237174 (-)

Gene ID: Rep_3477_c_0_2144
Type: TC
Location: 2237217 - 2238572 (-)

Gene ID: Rep_3477_c_0_2145
Type: pfam
Location: 2238596 - 2239423 (-)

Gene ID: Rep_3477_c_0_2146
Type: CAZyme
Location: 2239434 - 2240228 (-)

Gene ID: Rep_3477_c_0_2147
Type: TC
Location: 2240225 - 2241589 (-)

Gene ID: Rep_3477_c_0_2148
Type: TC
Location: 2241842 - 2242564 (+)

Gene ID: Rep_3477_c_0_2149
Type: TC
Location: 2242580 - 2242909 (+)

Gene ID: Rep_3477_c_0_2150
Type: TC
Location: 2243262 - 2244488 (+)

Gene ID: Rep_3477_c_0_2151
Type: TC
Location: 2244710 - 2245594 (+)

Gene ID: Rep_3477_c_0_2152
Type: TC
Location: 2245607 - 2246704 (+)

Gene ID: Rep_3477_c_0_2153
Type: TC
Location: 2246701 - 2247459 (+)

Gene ID: Rep_3477_c_0_2154
Type: TC
Location: 2247476 - 2248186 (+)

Gene ID: Rep_3477_c_0_2155
Type: TC
Location: 2248221 - 2248838 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_3477_c_0_2151	vegetarian > omnivore	1.99201	0.03635

Gene ID	Condition Pair	log2FC	FDR P-value
Rep_3477_c_0_2143	flexitarian > omnivore	2.89030	0.03983
Rep_3477_c_0_2143	vegan > omnivore	1.83679	0.00331
Rep_3477_c_0_2145	flexitarian > omnivore	15.98947	0.03983
Rep_3477_c_0_2145	vegan > omnivore	15.21519	0.00331
Rep_3477_c_0_2146	flexitarian > omnivore	16.36099	0.03983
Rep_3477_c_0_2146	vegan > omnivore	15.04862	0.00331
Rep_3477_c_0_2147	flexitarian > omnivore	5.27595	0.04473
Rep_3477_c_0_2147	vegan > omnivore	4.11217	0.00331
Rep_3477_c_0_2148	vegan > omnivore	3.40409	0.00331
Rep_3477_c_0_2149	flexitarian > omnivore	16.38088	0.03983
Rep_3477_c_0_2149	vegan > omnivore	14.86566	0.00331
Rep_3477_c_0_2155	flexitarian > omnivore	16.33772	0.03983
Rep_3477_c_0_2155	vegan > omnivore	14.79877	0.00331