Cluster: Rep_3477_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3477
- CGC Family ID: CGCFAM_00358
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3477_c_0 | Rep_3477_c_0_2123 | 2211021 | 2213375 | + | 3.A.9.1.2 |
| pfam | Rep_3477_c_0 | Rep_3477_c_0_2124 | 2213430 | 2214170 | + | Amidase_3 | SH3_3 |
| NULL(UNKNOWN) | Rep_3477_c_0 | Rep_3477_c_0_2125 | 2214215 | 2214328 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3477_c_0 | Rep_3477_c_0_2126 | 2214330 | 2217794 | - | GH2 |
Gene ID: Rep_3477_c_0_2123
Type: TC
Location: 2211021 - 2213375 (+)
Type: TC
Location: 2211021 - 2213375 (+)
Gene ID: Rep_3477_c_0_2124
Type: pfam
Location: 2213430 - 2214170 (+)
Type: pfam
Location: 2213430 - 2214170 (+)
Gene ID: Rep_3477_c_0_2125
Type:
Location: 2214215 - 2214328 (-)
Type:
Location: 2214215 - 2214328 (-)
Gene ID: Rep_3477_c_0_2126
Type: CAZyme
Location: 2214330 - 2217794 (-)
Type: CAZyme
Location: 2214330 - 2217794 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola butyrica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.