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Cluster: Rep_3477_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3477_c_0 Rep_3477_c_0_2036 2119032 2120633 + 3.D.10.1.2
TC Rep_3477_c_0 Rep_3477_c_0_2037 2120851 2122128 + 2.A.81.2.1
TC Rep_3477_c_0 Rep_3477_c_0_2038 2122263 2123645 + 3.A.1.1.45
TC Rep_3477_c_0 Rep_3477_c_0_2039 2123679 2124521 + 3.A.1.1.45
TC Rep_3477_c_0 Rep_3477_c_0_2040 2124518 2125345 + 3.A.1.1.45
CAZyme Rep_3477_c_0 Rep_3477_c_0_2041 2125493 2126689 - CE2
NULL(UNKNOWN) Rep_3477_c_0 Rep_3477_c_0_2042 2126907 2129078 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_3477_c_0 Rep_3477_c_0_2043 2129208 2131379 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3477_c_0 Rep_3477_c_0_2044 2131439 2133313 + 2.A.9.3.7
Gene ID: Rep_3477_c_0_2036
Type: TC
Location: 2119032 - 2120633 (+)
Gene ID: Rep_3477_c_0_2037
Type: TC
Location: 2120851 - 2122128 (+)
Gene ID: Rep_3477_c_0_2038
Type: TC
Location: 2122263 - 2123645 (+)
Gene ID: Rep_3477_c_0_2039
Type: TC
Location: 2123679 - 2124521 (+)
Gene ID: Rep_3477_c_0_2040
Type: TC
Location: 2124518 - 2125345 (+)
Gene ID: Rep_3477_c_0_2041
Type: CAZyme
Location: 2125493 - 2126689 (-)
Gene ID: Rep_3477_c_0_2042
Type:
Location: 2126907 - 2129078 (+)
Gene ID: Rep_3477_c_0_2043
Type:
Location: 2129208 - 2131379 (+)
Gene ID: Rep_3477_c_0_2044
Type: TC
Location: 2131439 - 2133313 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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