Cluster: Rep_3477_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3477
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3477_c_0 | Rep_3477_c_0_2016 | 2094617 | 2097016 | + | GH94 |
| pfam | Rep_3477_c_0 | Rep_3477_c_0_2017 | 2097196 | 2098881 | + | TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N |
| pfam | Rep_3477_c_0 | Rep_3477_c_0_2018 | 2099063 | 2099893 | + | PDH_N | NAD_binding_2 | PDH_C |
| TC | Rep_3477_c_0 | Rep_3477_c_0_2019 | 2100001 | 2100636 | + | 1.A.16.5.1 |
| pfam | Rep_3477_c_0 | Rep_3477_c_0_2020 | 2100794 | 2103568 | - | FtsX |
| TC | Rep_3477_c_0 | Rep_3477_c_0_2021 | 2103568 | 2104269 | - | 3.A.1.134.11 |
Gene ID: Rep_3477_c_0_2016
Type: CAZyme
Location: 2094617 - 2097016 (+)
Type: CAZyme
Location: 2094617 - 2097016 (+)
Gene ID: Rep_3477_c_0_2017
Type: pfam
Location: 2097196 - 2098881 (+)
Type: pfam
Location: 2097196 - 2098881 (+)
Gene ID: Rep_3477_c_0_2018
Type: pfam
Location: 2099063 - 2099893 (+)
Type: pfam
Location: 2099063 - 2099893 (+)
Gene ID: Rep_3477_c_0_2019
Type: TC
Location: 2100001 - 2100636 (+)
Type: TC
Location: 2100001 - 2100636 (+)
Gene ID: Rep_3477_c_0_2020
Type: pfam
Location: 2100794 - 2103568 (-)
Type: pfam
Location: 2100794 - 2103568 (-)
Gene ID: Rep_3477_c_0_2021
Type: TC
Location: 2103568 - 2104269 (-)
Type: TC
Location: 2103568 - 2104269 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola butyrica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.