dbCAN Logo

Cluster: Rep_3477_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3477_c_0 Rep_3477_c_0_1587 1691950 1692942 + 8.A.5.1.3
CAZyme Rep_3477_c_0 Rep_3477_c_0_1588 1692951 1693988 + GH26
CAZyme Rep_3477_c_0 Rep_3477_c_0_1589 1694147 1696900 - GH3
pfam Rep_3477_c_0 Rep_3477_c_0_1590 1697143 1698018 + Lactamase_B | Lactamase_B_2
pfam Rep_3477_c_0 Rep_3477_c_0_1591 1698198 1698689 + Zn_Ribbon_1
TC Rep_3477_c_0 Rep_3477_c_0_1592 1698845 1700107 + 2.A.86.1.8
TC Rep_3477_c_0 Rep_3477_c_0_1593 1700167 1701444 - 3.A.1.11.7
TC Rep_3477_c_0 Rep_3477_c_0_1594 1701449 1702240 - 3.A.1.11.8
TC Rep_3477_c_0 Rep_3477_c_0_1595 1702254 1703060 - 3.A.1.11.2
TC Rep_3477_c_0 Rep_3477_c_0_1596 1703065 1704108 - 3.A.1.11.7
Gene ID: Rep_3477_c_0_1587
Type: TC
Location: 1691950 - 1692942 (+)
Gene ID: Rep_3477_c_0_1588
Type: CAZyme
Location: 1692951 - 1693988 (+)
Gene ID: Rep_3477_c_0_1589
Type: CAZyme
Location: 1694147 - 1696900 (-)
Gene ID: Rep_3477_c_0_1590
Type: pfam
Location: 1697143 - 1698018 (+)
Gene ID: Rep_3477_c_0_1591
Type: pfam
Location: 1698198 - 1698689 (+)
Gene ID: Rep_3477_c_0_1592
Type: TC
Location: 1698845 - 1700107 (+)
Gene ID: Rep_3477_c_0_1593
Type: TC
Location: 1700167 - 1701444 (-)
Gene ID: Rep_3477_c_0_1594
Type: TC
Location: 1701449 - 1702240 (-)
Gene ID: Rep_3477_c_0_1595
Type: TC
Location: 1702254 - 1703060 (-)
Gene ID: Rep_3477_c_0_1596
Type: TC
Location: 1703065 - 1704108 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_3477_c_0_1587 vegetarian > omnivore 1.30887 0.03635

🧭 Explore Read Mapping of CGC

← Back to Cluster List