Cluster: Rep_3477_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3477
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3477_c_0 | Rep_3477_c_0_1358 | 1455416 | 1456609 | + | 2.A.27.1.3 |
| NULL(UNKNOWN) | Rep_3477_c_0 | Rep_3477_c_0_1359 | 1456628 | 1456813 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_3477_c_0 | Rep_3477_c_0_1360 | 1456865 | 1457068 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3477_c_0 | Rep_3477_c_0_1361 | 1457068 | 1458225 | - | GH27 |
| TF | Rep_3477_c_0 | Rep_3477_c_0_1362 | 1458341 | 1459321 | + | HTH_AraC | HTH_AraC |
| STP | Rep_3477_c_0 | Rep_3477_c_0_1363 | 1459371 | 1460993 | - | EAL |
| TC | Rep_3477_c_0 | Rep_3477_c_0_1364 | 1461165 | 1461701 | - | 3.A.1.122.7 |
Gene ID: Rep_3477_c_0_1358
Type: TC
Location: 1455416 - 1456609 (+)
Type: TC
Location: 1455416 - 1456609 (+)
Gene ID: Rep_3477_c_0_1359
Type:
Location: 1456628 - 1456813 (+)
Type:
Location: 1456628 - 1456813 (+)
Gene ID: Rep_3477_c_0_1360
Type:
Location: 1456865 - 1457068 (-)
Type:
Location: 1456865 - 1457068 (-)
Gene ID: Rep_3477_c_0_1361
Type: CAZyme
Location: 1457068 - 1458225 (-)
Type: CAZyme
Location: 1457068 - 1458225 (-)
Gene ID: Rep_3477_c_0_1362
Type: TF
Location: 1458341 - 1459321 (+)
Type: TF
Location: 1458341 - 1459321 (+)
Gene ID: Rep_3477_c_0_1363
Type: STP
Location: 1459371 - 1460993 (-)
Type: STP
Location: 1459371 - 1460993 (-)
Gene ID: Rep_3477_c_0_1364
Type: TC
Location: 1461165 - 1461701 (-)
Type: TC
Location: 1461165 - 1461701 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola butyrica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.