Cluster: Rep_3477_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3477
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3477_c_0 | Rep_3477_c_0_1222 | 1310697 | 1311758 | - | 3.A.15.2.1 |
| pfam | Rep_3477_c_0 | Rep_3477_c_0_1223 | 1311779 | 1312324 | - | CobU |
| NULL(UNKNOWN) | Rep_3477_c_0 | Rep_3477_c_0_1224 | 1312672 | 1313094 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3477_c_0 | Rep_3477_c_0_1225 | 1313148 | 1315403 | - | GH74 | GH74 |
Gene ID: Rep_3477_c_0_1222
Type: TC
Location: 1310697 - 1311758 (-)
Type: TC
Location: 1310697 - 1311758 (-)
Gene ID: Rep_3477_c_0_1223
Type: pfam
Location: 1311779 - 1312324 (-)
Type: pfam
Location: 1311779 - 1312324 (-)
Gene ID: Rep_3477_c_0_1224
Type:
Location: 1312672 - 1313094 (+)
Type:
Location: 1312672 - 1313094 (+)
Gene ID: Rep_3477_c_0_1225
Type: CAZyme
Location: 1313148 - 1315403 (-)
Type: CAZyme
Location: 1313148 - 1315403 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola butyrica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.