Cluster: Rep_3477_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3477
- CGC Family ID: CGCFAM_07678
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3477_c_0 | Rep_3477_c_0_1192 | 1280930 | 1282771 | + | GH25 |
| TC | Rep_3477_c_0 | Rep_3477_c_0_1193 | 1283331 | 1284272 | - | 1.A.23.2.1 |
| TC | Rep_3477_c_0 | Rep_3477_c_0_1194 | 1284560 | 1285348 | + | 3.A.1.3.10 |
| TC | Rep_3477_c_0 | Rep_3477_c_0_1195 | 1285439 | 1286146 | + | 3.A.1.3.15 |
| TC | Rep_3477_c_0 | Rep_3477_c_0_1196 | 1286133 | 1286858 | + | 3.A.1.3.25 |
Gene ID: Rep_3477_c_0_1192
Type: CAZyme
Location: 1280930 - 1282771 (+)
Type: CAZyme
Location: 1280930 - 1282771 (+)
Gene ID: Rep_3477_c_0_1193
Type: TC
Location: 1283331 - 1284272 (-)
Type: TC
Location: 1283331 - 1284272 (-)
Gene ID: Rep_3477_c_0_1194
Type: TC
Location: 1284560 - 1285348 (+)
Type: TC
Location: 1284560 - 1285348 (+)
Gene ID: Rep_3477_c_0_1195
Type: TC
Location: 1285439 - 1286146 (+)
Type: TC
Location: 1285439 - 1286146 (+)
Gene ID: Rep_3477_c_0_1196
Type: TC
Location: 1286133 - 1286858 (+)
Type: TC
Location: 1286133 - 1286858 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola butyrica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3477_c_0_1195 | vegan > omnivore | 2.22705 | 0.01786 |
| Rep_3477_c_0_1195 | vegetarian > omnivore | 1.85239 | 0.03635 |