Cluster: Rep_3477_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3477
- CGC Family ID: CGCFAM_01657
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3477_c_0 | Rep_3477_c_0_1166 | 1253556 | 1255328 | - | 3.A.1.106.3 |
| TC | Rep_3477_c_0 | Rep_3477_c_0_1167 | 1255342 | 1257087 | - | 3.A.1.106.3 |
| pfam | Rep_3477_c_0 | Rep_3477_c_0_1168 | 1257430 | 1259529 | - | PP_kinase | PP_kinase_N | PP_kinase_C | PLDc_2 | PP_kinase_C_1 |
| CAZyme | Rep_3477_c_0 | Rep_3477_c_0_1169 | 1259634 | 1261001 | - | GH4 |
Gene ID: Rep_3477_c_0_1166
Type: TC
Location: 1253556 - 1255328 (-)
Type: TC
Location: 1253556 - 1255328 (-)
Gene ID: Rep_3477_c_0_1167
Type: TC
Location: 1255342 - 1257087 (-)
Type: TC
Location: 1255342 - 1257087 (-)
Gene ID: Rep_3477_c_0_1168
Type: pfam
Location: 1257430 - 1259529 (-)
Type: pfam
Location: 1257430 - 1259529 (-)
Gene ID: Rep_3477_c_0_1169
Type: CAZyme
Location: 1259634 - 1261001 (-)
Type: CAZyme
Location: 1259634 - 1261001 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola butyrica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.