Cluster: Rep_3477_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3477
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3477_c_0 | Rep_3477_c_0_118 | 124520 | 126295 | - | GH23 |
| peptidase | Rep_3477_c_0 | Rep_3477_c_0_119 | 126329 | 127102 | - | C60.UPB |
| pfam | Rep_3477_c_0 | Rep_3477_c_0_120 | 127168 | 127572 | - | DUF6075 |
| TC | Rep_3477_c_0 | Rep_3477_c_0_121 | 127577 | 129910 | - | 3.A.7.7.1 |
Gene ID: Rep_3477_c_0_118
Type: CAZyme
Location: 124520 - 126295 (-)
Type: CAZyme
Location: 124520 - 126295 (-)
Gene ID: Rep_3477_c_0_119
Type: peptidase
Location: 126329 - 127102 (-)
Type: peptidase
Location: 126329 - 127102 (-)
Gene ID: Rep_3477_c_0_120
Type: pfam
Location: 127168 - 127572 (-)
Type: pfam
Location: 127168 - 127572 (-)
Gene ID: Rep_3477_c_0_121
Type: TC
Location: 127577 - 129910 (-)
Type: TC
Location: 127577 - 129910 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola butyrica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3477_c_0_119 | vegetarian > omnivore | 1.06047 | 0.03001 |
| Rep_3477_c_0_119 | vegetarian > vegan | 1.05044 | 0.03783 |