Cluster: Rep_3468_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3468
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3468_c_101 | Rep_3468_c_101_1 | 220 | 3240 | - | GH5_4 |
| pfam | Rep_3468_c_101 | Rep_3468_c_101_2 | 3421 | 3594 | - | FeoB_associated |
| TC | Rep_3468_c_101 | Rep_3468_c_101_3 | 3611 | 6034 | - | 9.A.8.1.6 |
| STP | Rep_3468_c_101 | Rep_3468_c_101_4 | 6096 | 6314 | - | FeoA |
| STP | Rep_3468_c_101 | Rep_3468_c_101_5 | 6527 | 6739 | - | FeoA |
| CAZyme | Rep_3468_c_101 | Rep_3468_c_101_6 | 7004 | 8485 | + | CBM91 | GH43_12 |
Gene ID: Rep_3468_c_101_1
Type: CAZyme
Location: 220 - 3240 (-)
Type: CAZyme
Location: 220 - 3240 (-)
Gene ID: Rep_3468_c_101_2
Type: pfam
Location: 3421 - 3594 (-)
Type: pfam
Location: 3421 - 3594 (-)
Gene ID: Rep_3468_c_101_3
Type: TC
Location: 3611 - 6034 (-)
Type: TC
Location: 3611 - 6034 (-)
Gene ID: Rep_3468_c_101_4
Type: STP
Location: 6096 - 6314 (-)
Type: STP
Location: 6096 - 6314 (-)
Gene ID: Rep_3468_c_101_5
Type: STP
Location: 6527 - 6739 (-)
Type: STP
Location: 6527 - 6739 (-)
Gene ID: Rep_3468_c_101_6
Type: CAZyme
Location: 7004 - 8485 (+)
Type: CAZyme
Location: 7004 - 8485 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS1601
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.