Cluster: Rep_3468_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3468
- CGC Family ID: CGCFAM_03269
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3468_c_39 | Rep_3468_c_39_7 | 5880 | 6827 | - | GT2 |
| TC | Rep_3468_c_39 | Rep_3468_c_39_8 | 6935 | 8314 | - | 2.A.66.1.32 |
| TC | Rep_3468_c_39 | Rep_3468_c_39_9 | 8498 | 9895 | - | 3.B.1.1.6 |
| TC | Rep_3468_c_39 | Rep_3468_c_39_10 | 9918 | 10289 | - | 3.B.1.1.2 |
| TC | Rep_3468_c_39 | Rep_3468_c_39_11 | 10324 | 11670 | - | 3.B.1.1.5 |
Gene ID: Rep_3468_c_39_7
Type: CAZyme
Location: 5880 - 6827 (-)
Type: CAZyme
Location: 5880 - 6827 (-)
Gene ID: Rep_3468_c_39_8
Type: TC
Location: 6935 - 8314 (-)
Type: TC
Location: 6935 - 8314 (-)
Gene ID: Rep_3468_c_39_9
Type: TC
Location: 8498 - 9895 (-)
Type: TC
Location: 8498 - 9895 (-)
Gene ID: Rep_3468_c_39_10
Type: TC
Location: 9918 - 10289 (-)
Type: TC
Location: 9918 - 10289 (-)
Gene ID: Rep_3468_c_39_11
Type: TC
Location: 10324 - 11670 (-)
Type: TC
Location: 10324 - 11670 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS1601
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.