Cluster: Rep_3468_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3468
- CGC Family ID: CGCFAM_06350
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3468_c_32 | Rep_3468_c_32_6 | 7548 | 9107 | + | 3.A.1.32.2 |
| pfam | Rep_3468_c_32 | Rep_3468_c_32_7 | 9104 | 9697 | + | ECF-ribofla_trS | DUF6580 |
| CAZyme | Rep_3468_c_32 | Rep_3468_c_32_8 | 9854 | 13912 | + | GH5_4 |
Gene ID: Rep_3468_c_32_6
Type: TC
Location: 7548 - 9107 (+)
Type: TC
Location: 7548 - 9107 (+)
Gene ID: Rep_3468_c_32_7
Type: pfam
Location: 9104 - 9697 (+)
Type: pfam
Location: 9104 - 9697 (+)
Gene ID: Rep_3468_c_32_8
Type: CAZyme
Location: 9854 - 13912 (+)
Type: CAZyme
Location: 9854 - 13912 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS1601
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.