Cluster: Rep_3468_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3468
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3468_c_20 | Rep_3468_c_20_18 | 19444 | 21381 | - | GH13_14 |
| pfam | Rep_3468_c_20 | Rep_3468_c_20_19 | 21396 | 22244 | - | PS_Dcarbxylase |
| pfam | Rep_3468_c_20 | Rep_3468_c_20_20 | 22246 | 22884 | - | CDP-OH_P_transf |
| TC | Rep_3468_c_20 | Rep_3468_c_20_21 | 22901 | 23869 | - | 9.B.146.1.6 |
Gene ID: Rep_3468_c_20_18
Type: CAZyme
Location: 19444 - 21381 (-)
Type: CAZyme
Location: 19444 - 21381 (-)
Gene ID: Rep_3468_c_20_19
Type: pfam
Location: 21396 - 22244 (-)
Type: pfam
Location: 21396 - 22244 (-)
Gene ID: Rep_3468_c_20_20
Type: pfam
Location: 22246 - 22884 (-)
Type: pfam
Location: 22246 - 22884 (-)
Gene ID: Rep_3468_c_20_21
Type: TC
Location: 22901 - 23869 (-)
Type: TC
Location: 22901 - 23869 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS1601
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.