Cluster: Rep_3468_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3468
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3468_c_121 | Rep_3468_c_121_2 | 980 | 1861 | - | 2.A.115.1.5 |
| pfam | Rep_3468_c_121 | Rep_3468_c_121_3 | 1873 | 2979 | - | UPF0020 | THUMP | RlmL_1st |
| CAZyme | Rep_3468_c_121 | Rep_3468_c_121_4 | 3032 | 5272 | - | GT51 |
Gene ID: Rep_3468_c_121_2
Type: TC
Location: 980 - 1861 (-)
Type: TC
Location: 980 - 1861 (-)
Gene ID: Rep_3468_c_121_3
Type: pfam
Location: 1873 - 2979 (-)
Type: pfam
Location: 1873 - 2979 (-)
Gene ID: Rep_3468_c_121_4
Type: CAZyme
Location: 3032 - 5272 (-)
Type: CAZyme
Location: 3032 - 5272 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS1601
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.