Cluster: Rep_3468_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3468
- CGC Family ID: CGCFAM_10986
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3468_c_120 | Rep_3468_c_120_3 | 471 | 1094 | - | 2.A.115.2.14 |
| NULL(UNKNOWN) | Rep_3468_c_120 | Rep_3468_c_120_4 | 1163 | 1309 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3468_c_120 | Rep_3468_c_120_5 | 1293 | 1892 | - | GH25 |
| TC | Rep_3468_c_120 | Rep_3468_c_120_6 | 2030 | 2476 | + | 9.A.11.1.1 |
| NULL(UNKNOWN) | Rep_3468_c_120 | Rep_3468_c_120_7 | 2524 | 3009 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3468_c_120 | Rep_3468_c_120_8 | 3156 | 3746 | - | PTAC |
| TC | Rep_3468_c_120 | Rep_3468_c_120_9 | 3874 | 4671 | + | 3.A.11.1.3 |
Gene ID: Rep_3468_c_120_3
Type: TC
Location: 471 - 1094 (-)
Type: TC
Location: 471 - 1094 (-)
Gene ID: Rep_3468_c_120_4
Type:
Location: 1163 - 1309 (-)
Type:
Location: 1163 - 1309 (-)
Gene ID: Rep_3468_c_120_5
Type: CAZyme
Location: 1293 - 1892 (-)
Type: CAZyme
Location: 1293 - 1892 (-)
Gene ID: Rep_3468_c_120_6
Type: TC
Location: 2030 - 2476 (+)
Type: TC
Location: 2030 - 2476 (+)
Gene ID: Rep_3468_c_120_7
Type:
Location: 2524 - 3009 (+)
Type:
Location: 2524 - 3009 (+)
Gene ID: Rep_3468_c_120_8
Type: pfam
Location: 3156 - 3746 (-)
Type: pfam
Location: 3156 - 3746 (-)
Gene ID: Rep_3468_c_120_9
Type: TC
Location: 3874 - 4671 (+)
Type: TC
Location: 3874 - 4671 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS1601
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.