dbCAN Logo

Cluster: Rep_3467_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3467_c_5 Rep_3467_c_5_81 81525 82805 + 3.D.6.1.2
TC Rep_3467_c_5 Rep_3467_c_5_82 82823 83749 + 3.D.6.1.2
pfam Rep_3467_c_5 Rep_3467_c_5_83 83746 84252 + FMN_bind
TC Rep_3467_c_5 Rep_3467_c_5_84 84256 84918 + 3.D.6.1.2
TC Rep_3467_c_5 Rep_3467_c_5_85 84919 85500 + 3.D.6.1.2
NULL(UNKNOWN) Rep_3467_c_5 Rep_3467_c_5_86 85501 86769 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3467_c_5 Rep_3467_c_5_87 86775 87596 + 3.D.6.1.2
CAZyme Rep_3467_c_5 Rep_3467_c_5_88 88128 90578 - GH94
Gene ID: Rep_3467_c_5_81
Type: TC
Location: 81525 - 82805 (+)
Gene ID: Rep_3467_c_5_82
Type: TC
Location: 82823 - 83749 (+)
Gene ID: Rep_3467_c_5_83
Type: pfam
Location: 83746 - 84252 (+)
Gene ID: Rep_3467_c_5_84
Type: TC
Location: 84256 - 84918 (+)
Gene ID: Rep_3467_c_5_85
Type: TC
Location: 84919 - 85500 (+)
Gene ID: Rep_3467_c_5_86
Type:
Location: 85501 - 86769 (+)
Gene ID: Rep_3467_c_5_87
Type: TC
Location: 86775 - 87596 (+)
Gene ID: Rep_3467_c_5_88
Type: CAZyme
Location: 88128 - 90578 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List