Cluster: Rep_3467_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3467
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3467_c_1 | Rep_3467_c_1_113 | 129510 | 131111 | + | 3.A.1.121.4 |
| STP | Rep_3467_c_1 | Rep_3467_c_1_114 | 131466 | 133364 | + | GGDEF | Peripla_BP_3 |
| pfam | Rep_3467_c_1 | Rep_3467_c_1_115 | 133617 | 134540 | + | DUF4430 |
| CAZyme | Rep_3467_c_1 | Rep_3467_c_1_116 | 134695 | 138762 | + | GH5_4 |
| sulfatase | Rep_3467_c_1 | Rep_3467_c_1_117 | 138903 | 140720 | + | S1_97 |
| TC | Rep_3467_c_1 | Rep_3467_c_1_118 | 140747 | 141337 | + | 3.D.1.8.1 |
Gene ID: Rep_3467_c_1_113
Type: TC
Location: 129510 - 131111 (+)
Type: TC
Location: 129510 - 131111 (+)
Gene ID: Rep_3467_c_1_114
Type: STP
Location: 131466 - 133364 (+)
Type: STP
Location: 131466 - 133364 (+)
Gene ID: Rep_3467_c_1_115
Type: pfam
Location: 133617 - 134540 (+)
Type: pfam
Location: 133617 - 134540 (+)
Gene ID: Rep_3467_c_1_116
Type: CAZyme
Location: 134695 - 138762 (+)
Type: CAZyme
Location: 134695 - 138762 (+)
Gene ID: Rep_3467_c_1_117
Type: sulfatase
Location: 138903 - 140720 (+)
Type: sulfatase
Location: 138903 - 140720 (+)
Gene ID: Rep_3467_c_1_118
Type: TC
Location: 140747 - 141337 (+)
Type: TC
Location: 140747 - 141337 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS1601
Species
UMGS1601 sp900553335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.