Cluster: Rep_3467_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3467
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3467_c_1 | Rep_3467_c_1_20 | 19366 | 21996 | + | 3.A.3.2.21 |
| pfam | Rep_3467_c_1 | Rep_3467_c_1_21 | 22156 | 25416 | + | YfhO | YfhO |
| NULL(UNKNOWN) | Rep_3467_c_1 | Rep_3467_c_1_22 | 25568 | 26098 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3467_c_1 | Rep_3467_c_1_23 | 26116 | 27051 | + | GT2 |
Gene ID: Rep_3467_c_1_20
Type: TC
Location: 19366 - 21996 (+)
Type: TC
Location: 19366 - 21996 (+)
Gene ID: Rep_3467_c_1_21
Type: pfam
Location: 22156 - 25416 (+)
Type: pfam
Location: 22156 - 25416 (+)
Gene ID: Rep_3467_c_1_22
Type:
Location: 25568 - 26098 (+)
Type:
Location: 25568 - 26098 (+)
Gene ID: Rep_3467_c_1_23
Type: CAZyme
Location: 26116 - 27051 (+)
Type: CAZyme
Location: 26116 - 27051 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS1601
Species
UMGS1601 sp900553335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.