Cluster: Rep_3467_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3467
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3467_c_18 | Rep_3467_c_18_6 | 4601 | 5263 | + | 3.A.1.122.2 |
| pfam | Rep_3467_c_18 | Rep_3467_c_18_7 | 5490 | 8489 | - | Dockerin_1 | LTD | CotH | Fn3_assoc | CHB_HEX_C_1 |
| CAZyme | Rep_3467_c_18 | Rep_3467_c_18_8 | 8917 | 11598 | + | GH5_2 |
Gene ID: Rep_3467_c_18_6
Type: TC
Location: 4601 - 5263 (+)
Type: TC
Location: 4601 - 5263 (+)
Gene ID: Rep_3467_c_18_7
Type: pfam
Location: 5490 - 8489 (-)
Type: pfam
Location: 5490 - 8489 (-)
Gene ID: Rep_3467_c_18_8
Type: CAZyme
Location: 8917 - 11598 (+)
Type: CAZyme
Location: 8917 - 11598 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS1601
Species
UMGS1601 sp900553335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.