Cluster: Rep_3467_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3467
- CGC Family ID: CGCFAM_00385
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3467_c_1 | Rep_3467_c_1_1 | 114 | 1709 | + | GH5_4 |
| TF | Rep_3467_c_1 | Rep_3467_c_1_2 | 1894 | 2898 | + | 0043758 |
| pfam | Rep_3467_c_1 | Rep_3467_c_1_3 | 2882 | 3454 | + | GrpE |
| TC | Rep_3467_c_1 | Rep_3467_c_1_4 | 3511 | 5355 | + | 1.A.33.1.4 |
Gene ID: Rep_3467_c_1_1
Type: CAZyme
Location: 114 - 1709 (+)
Type: CAZyme
Location: 114 - 1709 (+)
Gene ID: Rep_3467_c_1_2
Type: TF
Location: 1894 - 2898 (+)
Type: TF
Location: 1894 - 2898 (+)
Gene ID: Rep_3467_c_1_3
Type: pfam
Location: 2882 - 3454 (+)
Type: pfam
Location: 2882 - 3454 (+)
Gene ID: Rep_3467_c_1_4
Type: TC
Location: 3511 - 5355 (+)
Type: TC
Location: 3511 - 5355 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS1601
Species
UMGS1601 sp900553335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.