Cluster: Rep_3467_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3467
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3467_c_12 | Rep_3467_c_12_47 | 52180 | 54420 | + | GT51 |
| pfam | Rep_3467_c_12 | Rep_3467_c_12_48 | 54472 | 55578 | + | UPF0020 | THUMP | RlmL_1st |
| TC | Rep_3467_c_12 | Rep_3467_c_12_49 | 55591 | 56472 | + | 2.A.115.1.5 |
Gene ID: Rep_3467_c_12_47
Type: CAZyme
Location: 52180 - 54420 (+)
Type: CAZyme
Location: 52180 - 54420 (+)
Gene ID: Rep_3467_c_12_48
Type: pfam
Location: 54472 - 55578 (+)
Type: pfam
Location: 54472 - 55578 (+)
Gene ID: Rep_3467_c_12_49
Type: TC
Location: 55591 - 56472 (+)
Type: TC
Location: 55591 - 56472 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS1601
Species
UMGS1601 sp900553335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.