Cluster: Rep_3462_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_3462
- CGC Family ID: CGCFAM_11277
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3462_c_62 | Rep_3462_c_62_78 | 91534 | 92574 | - | GH26 |
| TC | Rep_3462_c_62 | Rep_3462_c_62_79 | 92765 | 94156 | - | 9.B.18.1.3 |
| pfam | Rep_3462_c_62 | Rep_3462_c_62_80 | 94374 | 94652 | - | YjbR |
| pfam | Rep_3462_c_62 | Rep_3462_c_62_81 | 94735 | 95193 | + | Sod_Cu |
| CAZyme | Rep_3462_c_62 | Rep_3462_c_62_82 | 95244 | 96287 | - | GH5_8 |
| CAZyme | Rep_3462_c_62 | Rep_3462_c_62_83 | 96457 | 97476 | - | GH5_8 |
| CAZyme | Rep_3462_c_62 | Rep_3462_c_62_84 | 97549 | 98556 | - | GH130_2 |
Gene ID: Rep_3462_c_62_78
Type: CAZyme
Location: 91534 - 92574 (-)
Type: CAZyme
Location: 91534 - 92574 (-)
Gene ID: Rep_3462_c_62_79
Type: TC
Location: 92765 - 94156 (-)
Type: TC
Location: 92765 - 94156 (-)
Gene ID: Rep_3462_c_62_80
Type: pfam
Location: 94374 - 94652 (-)
Type: pfam
Location: 94374 - 94652 (-)
Gene ID: Rep_3462_c_62_81
Type: pfam
Location: 94735 - 95193 (+)
Type: pfam
Location: 94735 - 95193 (+)
Gene ID: Rep_3462_c_62_82
Type: CAZyme
Location: 95244 - 96287 (-)
Type: CAZyme
Location: 95244 - 96287 (-)
Gene ID: Rep_3462_c_62_83
Type: CAZyme
Location: 96457 - 97476 (-)
Type: CAZyme
Location: 96457 - 97476 (-)
Gene ID: Rep_3462_c_62_84
Type: CAZyme
Location: 97549 - 98556 (-)
Type: CAZyme
Location: 97549 - 98556 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.