Cluster: Rep_3462_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3462
- CGC Family ID: CGCFAM_00124
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3462_c_62 | Rep_3462_c_62_17 | 19354 | 20379 | + | 3.A.1.1.11 |
| NULL(UNKNOWN) | Rep_3462_c_62 | Rep_3462_c_62_18 | 20610 | 21197 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3462_c_62 | Rep_3462_c_62_19 | 21232 | 22029 | + | Ubie_methyltran | TehB | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | Rep_3462_c_62 | Rep_3462_c_62_20 | 22158 | 22949 | + | 2.A.5.5.2 |
| CAZyme | Rep_3462_c_62 | Rep_3462_c_62_21 | 23049 | 24359 | + | GH13_20 |
Gene ID: Rep_3462_c_62_17
Type: TC
Location: 19354 - 20379 (+)
Type: TC
Location: 19354 - 20379 (+)
Gene ID: Rep_3462_c_62_18
Type:
Location: 20610 - 21197 (+)
Type:
Location: 20610 - 21197 (+)
Gene ID: Rep_3462_c_62_19
Type: pfam
Location: 21232 - 22029 (+)
Type: pfam
Location: 21232 - 22029 (+)
Gene ID: Rep_3462_c_62_20
Type: TC
Location: 22158 - 22949 (+)
Type: TC
Location: 22158 - 22949 (+)
Gene ID: Rep_3462_c_62_21
Type: CAZyme
Location: 23049 - 24359 (+)
Type: CAZyme
Location: 23049 - 24359 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.