Cluster: Rep_3462_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3462
- CGC Family ID: CGCFAM_01571
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3462_c_50 | Rep_3462_c_50_50 | 56722 | 57789 | + | CE2 |
| pfam | Rep_3462_c_50 | Rep_3462_c_50_51 | 57940 | 58935 | + | DAGK_cat | YegS_C |
| TC | Rep_3462_c_50 | Rep_3462_c_50_52 | 59117 | 60064 | + | 9.B.146.1.3 |
| TC | Rep_3462_c_50 | Rep_3462_c_50_53 | 60099 | 61139 | + | 4.D.2.1.5 |
| pfam | Rep_3462_c_50 | Rep_3462_c_50_54 | 61143 | 61778 | + | CDP-OH_P_transf |
| pfam | Rep_3462_c_50 | Rep_3462_c_50_55 | 61794 | 62663 | + | PS_Dcarbxylase |
| CAZyme | Rep_3462_c_50 | Rep_3462_c_50_56 | 62714 | 64678 | + | GH13_14 |
Gene ID: Rep_3462_c_50_50
Type: CAZyme
Location: 56722 - 57789 (+)
Type: CAZyme
Location: 56722 - 57789 (+)
Gene ID: Rep_3462_c_50_51
Type: pfam
Location: 57940 - 58935 (+)
Type: pfam
Location: 57940 - 58935 (+)
Gene ID: Rep_3462_c_50_52
Type: TC
Location: 59117 - 60064 (+)
Type: TC
Location: 59117 - 60064 (+)
Gene ID: Rep_3462_c_50_53
Type: TC
Location: 60099 - 61139 (+)
Type: TC
Location: 60099 - 61139 (+)
Gene ID: Rep_3462_c_50_54
Type: pfam
Location: 61143 - 61778 (+)
Type: pfam
Location: 61143 - 61778 (+)
Gene ID: Rep_3462_c_50_55
Type: pfam
Location: 61794 - 62663 (+)
Type: pfam
Location: 61794 - 62663 (+)
Gene ID: Rep_3462_c_50_56
Type: CAZyme
Location: 62714 - 64678 (+)
Type: CAZyme
Location: 62714 - 64678 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.