Cluster: Rep_3462_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3462
- CGC Family ID: CGCFAM_11278
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3462_c_44 | Rep_3462_c_44_2 | 2300 | 3472 | - | GH130_1 |
| pfam | Rep_3462_c_44 | Rep_3462_c_44_3 | 3567 | 5633 | - | fn3 | Beta-lactamase2 |
| pfam | Rep_3462_c_44 | Rep_3462_c_44_4 | 5768 | 6352 | - | Thia_YuaJ | ECF_trnsprt |
| TC | Rep_3462_c_44 | Rep_3462_c_44_5 | 6666 | 7313 | - | 2.A.38.4.6 |
| TC | Rep_3462_c_44 | Rep_3462_c_44_6 | 7392 | 8720 | - | 2.A.38.4.1 |
| pfam | Rep_3462_c_44 | Rep_3462_c_44_7 | 8844 | 9518 | - | ECF-ribofla_trS | ECF_trnsprt |
| TC | Rep_3462_c_44 | Rep_3462_c_44_8 | 9515 | 11173 | - | 3.A.1.32.2 |
Gene ID: Rep_3462_c_44_2
Type: CAZyme
Location: 2300 - 3472 (-)
Type: CAZyme
Location: 2300 - 3472 (-)
Gene ID: Rep_3462_c_44_3
Type: pfam
Location: 3567 - 5633 (-)
Type: pfam
Location: 3567 - 5633 (-)
Gene ID: Rep_3462_c_44_4
Type: pfam
Location: 5768 - 6352 (-)
Type: pfam
Location: 5768 - 6352 (-)
Gene ID: Rep_3462_c_44_5
Type: TC
Location: 6666 - 7313 (-)
Type: TC
Location: 6666 - 7313 (-)
Gene ID: Rep_3462_c_44_6
Type: TC
Location: 7392 - 8720 (-)
Type: TC
Location: 7392 - 8720 (-)
Gene ID: Rep_3462_c_44_7
Type: pfam
Location: 8844 - 9518 (-)
Type: pfam
Location: 8844 - 9518 (-)
Gene ID: Rep_3462_c_44_8
Type: TC
Location: 9515 - 11173 (-)
Type: TC
Location: 9515 - 11173 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.