Cluster: Rep_3462_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3462
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3462_c_90 | Rep_3462_c_90_17 | 17814 | 19355 | + | 2.A.66.1.40 |
| pfam | Rep_3462_c_90 | Rep_3462_c_90_18 | 19370 | 19918 | + | VanZ |
| CAZyme | Rep_3462_c_90 | Rep_3462_c_90_19 | 19969 | 20847 | + | GT12 |
| pfam | Rep_3462_c_90 | Rep_3462_c_90_20 | 20877 | 22094 | + | NTP_transf_5 |
| TC | Rep_3462_c_90 | Rep_3462_c_90_21 | 22385 | 23839 | - | 2.A.38.1.1 |
| TC | Rep_3462_c_90 | Rep_3462_c_90_22 | 23850 | 25208 | - | 2.A.38.1.1 |
Gene ID: Rep_3462_c_90_17
Type: TC
Location: 17814 - 19355 (+)
Type: TC
Location: 17814 - 19355 (+)
Gene ID: Rep_3462_c_90_18
Type: pfam
Location: 19370 - 19918 (+)
Type: pfam
Location: 19370 - 19918 (+)
Gene ID: Rep_3462_c_90_19
Type: CAZyme
Location: 19969 - 20847 (+)
Type: CAZyme
Location: 19969 - 20847 (+)
Gene ID: Rep_3462_c_90_20
Type: pfam
Location: 20877 - 22094 (+)
Type: pfam
Location: 20877 - 22094 (+)
Gene ID: Rep_3462_c_90_21
Type: TC
Location: 22385 - 23839 (-)
Type: TC
Location: 22385 - 23839 (-)
Gene ID: Rep_3462_c_90_22
Type: TC
Location: 23850 - 25208 (-)
Type: TC
Location: 23850 - 25208 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.