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Cluster: Rep_3462_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3462_c_90 Rep_3462_c_90_3 1659 2747 + GT4
NULL(UNKNOWN) Rep_3462_c_90 Rep_3462_c_90_4 2784 2987 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3462_c_90 Rep_3462_c_90_5 3058 4017 + 8.A.21.2.2
TC Rep_3462_c_90 Rep_3462_c_90_6 4333 6384 + 9.B.18.2.1
TC Rep_3462_c_90 Rep_3462_c_90_7 6427 7260 + 9.B.18.1.1
CAZyme Rep_3462_c_90 Rep_3462_c_90_8 7285 9528 + GT4
CAZyme Rep_3462_c_90 Rep_3462_c_90_9 9562 10617 + GT4
pfam Rep_3462_c_90 Rep_3462_c_90_10 10629 11753 + EpsG
CAZyme Rep_3462_c_90 Rep_3462_c_90_11 11738 12841 + GT4
CAZyme Rep_3462_c_90 Rep_3462_c_90_12 12863 13735 + GT2
CAZyme Rep_3462_c_90 Rep_3462_c_90_13 13732 14766 + GT2
Gene ID: Rep_3462_c_90_3
Type: CAZyme
Location: 1659 - 2747 (+)
Gene ID: Rep_3462_c_90_4
Type:
Location: 2784 - 2987 (+)
Gene ID: Rep_3462_c_90_5
Type: TC
Location: 3058 - 4017 (+)
Gene ID: Rep_3462_c_90_6
Type: TC
Location: 4333 - 6384 (+)
Gene ID: Rep_3462_c_90_7
Type: TC
Location: 6427 - 7260 (+)
Gene ID: Rep_3462_c_90_8
Type: CAZyme
Location: 7285 - 9528 (+)
Gene ID: Rep_3462_c_90_9
Type: CAZyme
Location: 9562 - 10617 (+)
Gene ID: Rep_3462_c_90_10
Type: pfam
Location: 10629 - 11753 (+)
Gene ID: Rep_3462_c_90_11
Type: CAZyme
Location: 11738 - 12841 (+)
Gene ID: Rep_3462_c_90_12
Type: CAZyme
Location: 12863 - 13735 (+)
Gene ID: Rep_3462_c_90_13
Type: CAZyme
Location: 13732 - 14766 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
FB2012
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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