Cluster: Rep_3462_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3462
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3462_c_84 | Rep_3462_c_84_45 | 29345 | 33427 | - | GH5_7 |
| TC | Rep_3462_c_84 | Rep_3462_c_84_46 | 33762 | 36389 | - | 4.A.2.1.17 |
| pfam | Rep_3462_c_84 | Rep_3462_c_84_47 | 36661 | 38106 | - | tRNA-synt_2b | HGTP_anticodon | ProRS-C_1 |
| NULL(UNKNOWN) | Rep_3462_c_84 | Rep_3462_c_84_48 | 38078 | 38377 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3462_c_84 | Rep_3462_c_84_49 | 38560 | 39441 | - | 8.A.21.2.3 |
Gene ID: Rep_3462_c_84_45
Type: CAZyme
Location: 29345 - 33427 (-)
Type: CAZyme
Location: 29345 - 33427 (-)
Gene ID: Rep_3462_c_84_46
Type: TC
Location: 33762 - 36389 (-)
Type: TC
Location: 33762 - 36389 (-)
Gene ID: Rep_3462_c_84_47
Type: pfam
Location: 36661 - 38106 (-)
Type: pfam
Location: 36661 - 38106 (-)
Gene ID: Rep_3462_c_84_48
Type:
Location: 38078 - 38377 (-)
Type:
Location: 38078 - 38377 (-)
Gene ID: Rep_3462_c_84_49
Type: TC
Location: 38560 - 39441 (-)
Type: TC
Location: 38560 - 39441 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.