Cluster: Rep_3462_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3462
- CGC Family ID: CGCFAM_01007
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3462_c_82 | Rep_3462_c_82_19 | 31906 | 34443 | - | GH25 |
| pfam | Rep_3462_c_82 | Rep_3462_c_82_20 | 34632 | 35114 | + | DUF4430 |
| TC | Rep_3462_c_82 | Rep_3462_c_82_21 | 35291 | 36085 | - | 3.A.1.34.1 |
| TC | Rep_3462_c_82 | Rep_3462_c_82_22 | 36089 | 37072 | - | 3.A.1.34.1 |
| TC | Rep_3462_c_82 | Rep_3462_c_82_23 | 37166 | 38179 | - | 3.A.1.34.1 |
Gene ID: Rep_3462_c_82_19
Type: CAZyme
Location: 31906 - 34443 (-)
Type: CAZyme
Location: 31906 - 34443 (-)
Gene ID: Rep_3462_c_82_20
Type: pfam
Location: 34632 - 35114 (+)
Type: pfam
Location: 34632 - 35114 (+)
Gene ID: Rep_3462_c_82_21
Type: TC
Location: 35291 - 36085 (-)
Type: TC
Location: 35291 - 36085 (-)
Gene ID: Rep_3462_c_82_22
Type: TC
Location: 36089 - 37072 (-)
Type: TC
Location: 36089 - 37072 (-)
Gene ID: Rep_3462_c_82_23
Type: TC
Location: 37166 - 38179 (-)
Type: TC
Location: 37166 - 38179 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.