Cluster: Rep_3461_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3461
- CGC Family ID: CGCFAM_00125
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3461_c_13 | Rep_3461_c_13_47 | 49942 | 50778 | + | GT2 |
| pfam | Rep_3461_c_13 | Rep_3461_c_13_48 | 51094 | 52104 | - | NAD_Gly3P_dh_N | ApbA | F420_oxidored | NAD_Gly3P_dh_C | GPD_NAD_C_bact |
| TC | Rep_3461_c_13 | Rep_3461_c_13_49 | 52123 | 52779 | - | 9.B.31.1.2 |
Gene ID: Rep_3461_c_13_47
Type: CAZyme
Location: 49942 - 50778 (+)
Type: CAZyme
Location: 49942 - 50778 (+)
Gene ID: Rep_3461_c_13_48
Type: pfam
Location: 51094 - 52104 (-)
Type: pfam
Location: 51094 - 52104 (-)
Gene ID: Rep_3461_c_13_49
Type: TC
Location: 52123 - 52779 (-)
Type: TC
Location: 52123 - 52779 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.