Cluster: Rep_3461_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3461
- CGC Family ID: CGCFAM_00358
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3461_c_11 | Rep_3461_c_11_40 | 41143 | 42690 | + | 2.A.21.2.5 |
| pfam | Rep_3461_c_11 | Rep_3461_c_11_41 | 42743 | 43477 | - | Amidase_3 |
| CAZyme | Rep_3461_c_11 | Rep_3461_c_11_42 | 43621 | 46077 | + | GH2 |
| TC | Rep_3461_c_11 | Rep_3461_c_11_43 | 46124 | 48394 | - | 3.A.9.1.2 |
Gene ID: Rep_3461_c_11_40
Type: TC
Location: 41143 - 42690 (+)
Type: TC
Location: 41143 - 42690 (+)
Gene ID: Rep_3461_c_11_41
Type: pfam
Location: 42743 - 43477 (-)
Type: pfam
Location: 42743 - 43477 (-)
Gene ID: Rep_3461_c_11_42
Type: CAZyme
Location: 43621 - 46077 (+)
Type: CAZyme
Location: 43621 - 46077 (+)
Gene ID: Rep_3461_c_11_43
Type: TC
Location: 46124 - 48394 (-)
Type: TC
Location: 46124 - 48394 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.