Cluster: Rep_3461_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3461
- CGC Family ID: CGCFAM_11278
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3461_c_115 | Rep_3461_c_115_19 | 22249 | 23904 | + | 3.A.1.32.2 |
| pfam | Rep_3461_c_115 | Rep_3461_c_115_20 | 23904 | 24578 | + | ECF-ribofla_trS | ECF_trnsprt | DUF6580 |
| TC | Rep_3461_c_115 | Rep_3461_c_115_21 | 24678 | 26006 | + | 2.A.38.4.1 |
| TC | Rep_3461_c_115 | Rep_3461_c_115_22 | 26088 | 26735 | + | 2.A.38.4.5 |
| TC | Rep_3461_c_115 | Rep_3461_c_115_23 | 26985 | 27551 | + | 2.A.88.3.1 |
| pfam | Rep_3461_c_115 | Rep_3461_c_115_24 | 27671 | 29752 | + | fn3 | Beta-lactamase2 |
| CAZyme | Rep_3461_c_115 | Rep_3461_c_115_25 | 29999 | 31171 | + | GH130_1 |
Gene ID: Rep_3461_c_115_19
Type: TC
Location: 22249 - 23904 (+)
Type: TC
Location: 22249 - 23904 (+)
Gene ID: Rep_3461_c_115_20
Type: pfam
Location: 23904 - 24578 (+)
Type: pfam
Location: 23904 - 24578 (+)
Gene ID: Rep_3461_c_115_21
Type: TC
Location: 24678 - 26006 (+)
Type: TC
Location: 24678 - 26006 (+)
Gene ID: Rep_3461_c_115_22
Type: TC
Location: 26088 - 26735 (+)
Type: TC
Location: 26088 - 26735 (+)
Gene ID: Rep_3461_c_115_23
Type: TC
Location: 26985 - 27551 (+)
Type: TC
Location: 26985 - 27551 (+)
Gene ID: Rep_3461_c_115_24
Type: pfam
Location: 27671 - 29752 (+)
Type: pfam
Location: 27671 - 29752 (+)
Gene ID: Rep_3461_c_115_25
Type: CAZyme
Location: 29999 - 31171 (+)
Type: CAZyme
Location: 29999 - 31171 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.