Cluster: Rep_3461_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_3461
- CGC Family ID: CGCFAM_11277
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3461_c_101 | Rep_3461_c_101_2 | 1361 | 2752 | - | 9.B.18.1.3 |
| pfam | Rep_3461_c_101 | Rep_3461_c_101_3 | 2820 | 3239 | - | YjbR |
| pfam | Rep_3461_c_101 | Rep_3461_c_101_4 | 3319 | 3777 | + | Sod_Cu |
| CAZyme | Rep_3461_c_101 | Rep_3461_c_101_5 | 3840 | 4880 | - | GH5_8 |
| CAZyme | Rep_3461_c_101 | Rep_3461_c_101_6 | 5050 | 6069 | - | GH5_8 |
| CAZyme | Rep_3461_c_101 | Rep_3461_c_101_7 | 6136 | 7143 | - | GH130_2 |
Gene ID: Rep_3461_c_101_2
Type: TC
Location: 1361 - 2752 (-)
Type: TC
Location: 1361 - 2752 (-)
Gene ID: Rep_3461_c_101_3
Type: pfam
Location: 2820 - 3239 (-)
Type: pfam
Location: 2820 - 3239 (-)
Gene ID: Rep_3461_c_101_4
Type: pfam
Location: 3319 - 3777 (+)
Type: pfam
Location: 3319 - 3777 (+)
Gene ID: Rep_3461_c_101_5
Type: CAZyme
Location: 3840 - 4880 (-)
Type: CAZyme
Location: 3840 - 4880 (-)
Gene ID: Rep_3461_c_101_6
Type: CAZyme
Location: 5050 - 6069 (-)
Type: CAZyme
Location: 5050 - 6069 (-)
Gene ID: Rep_3461_c_101_7
Type: CAZyme
Location: 6136 - 7143 (-)
Type: CAZyme
Location: 6136 - 7143 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.