Cluster: Rep_3460_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3460
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3460_c_76 | Rep_3460_c_76_7 | 3930 | 5468 | + | GH13_44 |
| TC | Rep_3460_c_76 | Rep_3460_c_76_8 | 5536 | 6186 | - | 3.A.2.3.2 |
| TC | Rep_3460_c_76 | Rep_3460_c_76_9 | 6216 | 7607 | - | 3.A.2.3.3 |
| TC | Rep_3460_c_76 | Rep_3460_c_76_10 | 7628 | 9370 | - | 3.A.2.3.2 |
Gene ID: Rep_3460_c_76_7
Type: CAZyme
Location: 3930 - 5468 (+)
Type: CAZyme
Location: 3930 - 5468 (+)
Gene ID: Rep_3460_c_76_8
Type: TC
Location: 5536 - 6186 (-)
Type: TC
Location: 5536 - 6186 (-)
Gene ID: Rep_3460_c_76_9
Type: TC
Location: 6216 - 7607 (-)
Type: TC
Location: 6216 - 7607 (-)
Gene ID: Rep_3460_c_76_10
Type: TC
Location: 7628 - 9370 (-)
Type: TC
Location: 7628 - 9370 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.