Cluster: Rep_3460_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3460
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3460_c_67 | Rep_3460_c_67_1 | 103 | 1467 | - | 2.A.66.1.7 |
| TC | Rep_3460_c_67 | Rep_3460_c_67_2 | 1691 | 2254 | - | 3.A.1.25.2 |
| NULL(UNKNOWN) | Rep_3460_c_67 | Rep_3460_c_67_3 | 2863 | 3714 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3460_c_67 | Rep_3460_c_67_4 | 3791 | 5497 | + | CBM2 | GH5_2 |
Gene ID: Rep_3460_c_67_1
Type: TC
Location: 103 - 1467 (-)
Type: TC
Location: 103 - 1467 (-)
Gene ID: Rep_3460_c_67_2
Type: TC
Location: 1691 - 2254 (-)
Type: TC
Location: 1691 - 2254 (-)
Gene ID: Rep_3460_c_67_3
Type:
Location: 2863 - 3714 (+)
Type:
Location: 2863 - 3714 (+)
Gene ID: Rep_3460_c_67_4
Type: CAZyme
Location: 3791 - 5497 (+)
Type: CAZyme
Location: 3791 - 5497 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.