Cluster: Rep_3460_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3460
- CGC Family ID: CGCFAM_03823
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3460_c_56 | Rep_3460_c_56_9 | 8642 | 9682 | - | 9.B.34.1.2 |
| NULL(UNKNOWN) | Rep_3460_c_56 | Rep_3460_c_56_10 | 9721 | 10776 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3460_c_56 | Rep_3460_c_56_11 | 11240 | 12343 | - | GH25 |
| TC | Rep_3460_c_56 | Rep_3460_c_56_12 | 12345 | 12758 | - | 1.E.19.1.7 |
Gene ID: Rep_3460_c_56_9
Type: TC
Location: 8642 - 9682 (-)
Type: TC
Location: 8642 - 9682 (-)
Gene ID: Rep_3460_c_56_10
Type:
Location: 9721 - 10776 (-)
Type:
Location: 9721 - 10776 (-)
Gene ID: Rep_3460_c_56_11
Type: CAZyme
Location: 11240 - 12343 (-)
Type: CAZyme
Location: 11240 - 12343 (-)
Gene ID: Rep_3460_c_56_12
Type: TC
Location: 12345 - 12758 (-)
Type: TC
Location: 12345 - 12758 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.