Cluster: Rep_3460_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3460
- CGC Family ID: CGCFAM_00384
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3460_c_47 | Rep_3460_c_47_67 | 65726 | 67093 | - | 3.A.5.1.1 |
| STP | Rep_3460_c_47 | Rep_3460_c_47_68 | 67110 | 67448 | - | Sigma70_r4 |
| CAZyme | Rep_3460_c_47 | Rep_3460_c_47_69 | 67822 | 69897 | - | GH3 |
Gene ID: Rep_3460_c_47_67
Type: TC
Location: 65726 - 67093 (-)
Type: TC
Location: 65726 - 67093 (-)
Gene ID: Rep_3460_c_47_68
Type: STP
Location: 67110 - 67448 (-)
Type: STP
Location: 67110 - 67448 (-)
Gene ID: Rep_3460_c_47_69
Type: CAZyme
Location: 67822 - 69897 (-)
Type: CAZyme
Location: 67822 - 69897 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.