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Cluster: Rep_3460_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3460_c_132 Rep_3460_c_132_88 75699 78134 - GT4
pfam Rep_3460_c_132 Rep_3460_c_132_89 78180 78572 - CTP_transf_like
pfam Rep_3460_c_132 Rep_3460_c_132_90 78610 79431 - LicD
TC Rep_3460_c_132 Rep_3460_c_132_91 79768 80508 - 3.A.1.103.1
TC Rep_3460_c_132 Rep_3460_c_132_92 80522 81322 - 3.A.1.103.4
CAZyme Rep_3460_c_132 Rep_3460_c_132_93 81334 82356 - GT2
CAZyme Rep_3460_c_132 Rep_3460_c_132_94 82349 83155 - GT2
TC Rep_3460_c_132 Rep_3460_c_132_95 83373 85334 - 9.B.34.1.2
Gene ID: Rep_3460_c_132_88
Type: CAZyme
Location: 75699 - 78134 (-)
Gene ID: Rep_3460_c_132_89
Type: pfam
Location: 78180 - 78572 (-)
Gene ID: Rep_3460_c_132_90
Type: pfam
Location: 78610 - 79431 (-)
Gene ID: Rep_3460_c_132_91
Type: TC
Location: 79768 - 80508 (-)
Gene ID: Rep_3460_c_132_92
Type: TC
Location: 80522 - 81322 (-)
Gene ID: Rep_3460_c_132_93
Type: CAZyme
Location: 81334 - 82356 (-)
Gene ID: Rep_3460_c_132_94
Type: CAZyme
Location: 82349 - 83155 (-)
Gene ID: Rep_3460_c_132_95
Type: TC
Location: 83373 - 85334 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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