Cluster: Rep_3460_CGC22
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3460
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3460_c_129 | Rep_3460_c_129_2 | 874 | 2580 | + | 2.A.53.3.11 |
| NULL(UNKNOWN) | Rep_3460_c_129 | Rep_3460_c_129_3 | 2653 | 2994 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3460_c_129 | Rep_3460_c_129_4 | 3192 | 5915 | - | GH5_4 |
Gene ID: Rep_3460_c_129_2
Type: TC
Location: 874 - 2580 (+)
Type: TC
Location: 874 - 2580 (+)
Gene ID: Rep_3460_c_129_3
Type:
Location: 2653 - 2994 (-)
Type:
Location: 2653 - 2994 (-)
Gene ID: Rep_3460_c_129_4
Type: CAZyme
Location: 3192 - 5915 (-)
Type: CAZyme
Location: 3192 - 5915 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.