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Cluster: Rep_3460_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3460_c_4 Rep_3460_c_4_24 28760 30538 + 2.A.58.2.2
pfam Rep_3460_c_4 Rep_3460_c_4_25 30670 31161 + dCMP_cyt_deam_1 | MafB19-deam
pfam Rep_3460_c_4 Rep_3460_c_4_26 31269 32033 + Metallophos
CAZyme Rep_3460_c_4 Rep_3460_c_4_27 32123 33127 - GT4
TC Rep_3460_c_4 Rep_3460_c_4_28 33212 33973 - 3.A.1.3.14
TC Rep_3460_c_4 Rep_3460_c_4_29 33986 34693 - 3.A.1.3.15
TC Rep_3460_c_4 Rep_3460_c_4_30 35058 37688 + 4.A.2.1.17
Gene ID: Rep_3460_c_4_24
Type: TC
Location: 28760 - 30538 (+)
Gene ID: Rep_3460_c_4_25
Type: pfam
Location: 30670 - 31161 (+)
Gene ID: Rep_3460_c_4_26
Type: pfam
Location: 31269 - 32033 (+)
Gene ID: Rep_3460_c_4_27
Type: CAZyme
Location: 32123 - 33127 (-)
Gene ID: Rep_3460_c_4_28
Type: TC
Location: 33212 - 33973 (-)
Gene ID: Rep_3460_c_4_29
Type: TC
Location: 33986 - 34693 (-)
Gene ID: Rep_3460_c_4_30
Type: TC
Location: 35058 - 37688 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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