Cluster: Rep_3460_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3460
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3460_c_98 | Rep_3460_c_98_12 | 13182 | 14438 | - | GH3 |
| TC | Rep_3460_c_98 | Rep_3460_c_98_13 | 14380 | 16146 | - | 3.A.1.106.3 |
| TC | Rep_3460_c_98 | Rep_3460_c_98_14 | 16147 | 17901 | - | 3.A.1.106.3 |
Gene ID: Rep_3460_c_98_12
Type: CAZyme
Location: 13182 - 14438 (-)
Type: CAZyme
Location: 13182 - 14438 (-)
Gene ID: Rep_3460_c_98_13
Type: TC
Location: 14380 - 16146 (-)
Type: TC
Location: 14380 - 16146 (-)
Gene ID: Rep_3460_c_98_14
Type: TC
Location: 16147 - 17901 (-)
Type: TC
Location: 16147 - 17901 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.