Cluster: Rep_3460_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3460
- CGC Family ID: CGCFAM_04794
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3460_c_91 | Rep_3460_c_91_20 | 18258 | 18863 | + | 9.B.31.1.2 |
| CAZyme | Rep_3460_c_91 | Rep_3460_c_91_21 | 18845 | 19984 | + | GT28 |
| pfam | Rep_3460_c_91 | Rep_3460_c_91_22 | 19986 | 20327 | + | ArsC |
| TC | Rep_3460_c_91 | Rep_3460_c_91_23 | 21150 | 21881 | - | 8.A.7.1.4 |
Gene ID: Rep_3460_c_91_20
Type: TC
Location: 18258 - 18863 (+)
Type: TC
Location: 18258 - 18863 (+)
Gene ID: Rep_3460_c_91_21
Type: CAZyme
Location: 18845 - 19984 (+)
Type: CAZyme
Location: 18845 - 19984 (+)
Gene ID: Rep_3460_c_91_22
Type: pfam
Location: 19986 - 20327 (+)
Type: pfam
Location: 19986 - 20327 (+)
Gene ID: Rep_3460_c_91_23
Type: TC
Location: 21150 - 21881 (-)
Type: TC
Location: 21150 - 21881 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.