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Cluster: Rep_3460_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3460_c_83 Rep_3460_c_83_44 51752 52147 - 9.B.70.1.1
TC Rep_3460_c_83 Rep_3460_c_83_45 52161 52355 - 9.B.70.1.1
pfam Rep_3460_c_83 Rep_3460_c_83_46 52372 52875 - Spore_III_AB
pfam Rep_3460_c_83 Rep_3460_c_83_47 52872 53768 - Spore_III_AA
TC Rep_3460_c_83 Rep_3460_c_83_48 53878 55878 - 1.B.52.2.2
pfam Rep_3460_c_83 Rep_3460_c_83_49 55937 57718 - tRNA-synt_2 | tRNA_anti-codon | GAD
TC Rep_3460_c_83 Rep_3460_c_83_50 57921 59078 - 2.A.1.60.3
pfam Rep_3460_c_83 Rep_3460_c_83_51 59081 59656 - DUF4358
CAZyme Rep_3460_c_83 Rep_3460_c_83_52 59653 60777 - GH26
Gene ID: Rep_3460_c_83_44
Type: TC
Location: 51752 - 52147 (-)
Gene ID: Rep_3460_c_83_45
Type: TC
Location: 52161 - 52355 (-)
Gene ID: Rep_3460_c_83_46
Type: pfam
Location: 52372 - 52875 (-)
Gene ID: Rep_3460_c_83_47
Type: pfam
Location: 52872 - 53768 (-)
Gene ID: Rep_3460_c_83_48
Type: TC
Location: 53878 - 55878 (-)
Gene ID: Rep_3460_c_83_49
Type: pfam
Location: 55937 - 57718 (-)
Gene ID: Rep_3460_c_83_50
Type: TC
Location: 57921 - 59078 (-)
Gene ID: Rep_3460_c_83_51
Type: pfam
Location: 59081 - 59656 (-)
Gene ID: Rep_3460_c_83_52
Type: CAZyme
Location: 59653 - 60777 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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