Cluster: Rep_3460_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3460
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3460_c_82 | Rep_3460_c_82_71 | 68653 | 69972 | - | GH13_20 |
| NULL(UNKNOWN) | Rep_3460_c_82 | Rep_3460_c_82_72 | 69996 | 70328 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3460_c_82 | Rep_3460_c_82_73 | 70649 | 71149 | + | 3.D.1.5.1 |
| STP | Rep_3460_c_82 | Rep_3460_c_82_74 | 71149 | 71706 | + | HATPase_c |
| NULL(UNKNOWN) | Rep_3460_c_82 | Rep_3460_c_82_75 | 71732 | 72100 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3460_c_82 | Rep_3460_c_82_76 | 72122 | 73915 | + | 3.D.1.5.1 |
Gene ID: Rep_3460_c_82_71
Type: CAZyme
Location: 68653 - 69972 (-)
Type: CAZyme
Location: 68653 - 69972 (-)
Gene ID: Rep_3460_c_82_72
Type:
Location: 69996 - 70328 (-)
Type:
Location: 69996 - 70328 (-)
Gene ID: Rep_3460_c_82_73
Type: TC
Location: 70649 - 71149 (+)
Type: TC
Location: 70649 - 71149 (+)
Gene ID: Rep_3460_c_82_74
Type: STP
Location: 71149 - 71706 (+)
Type: STP
Location: 71149 - 71706 (+)
Gene ID: Rep_3460_c_82_75
Type:
Location: 71732 - 72100 (+)
Type:
Location: 71732 - 72100 (+)
Gene ID: Rep_3460_c_82_76
Type: TC
Location: 72122 - 73915 (+)
Type: TC
Location: 72122 - 73915 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.