Cluster: Rep_3459_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3459
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3459_c_45 | Rep_3459_c_45_15 | 16094 | 18169 | + | GH3 |
| STP | Rep_3459_c_45 | Rep_3459_c_45_16 | 18210 | 19004 | - | PfkB |
| TF | Rep_3459_c_45 | Rep_3459_c_45_17 | 19268 | 19606 | + | HTH_10 |
| TC | Rep_3459_c_45 | Rep_3459_c_45_18 | 19640 | 21016 | + | 3.A.5.1.1 |
Gene ID: Rep_3459_c_45_15
Type: CAZyme
Location: 16094 - 18169 (+)
Type: CAZyme
Location: 16094 - 18169 (+)
Gene ID: Rep_3459_c_45_16
Type: STP
Location: 18210 - 19004 (-)
Type: STP
Location: 18210 - 19004 (-)
Gene ID: Rep_3459_c_45_17
Type: TF
Location: 19268 - 19606 (+)
Type: TF
Location: 19268 - 19606 (+)
Gene ID: Rep_3459_c_45_18
Type: TC
Location: 19640 - 21016 (+)
Type: TC
Location: 19640 - 21016 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp017935365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.